R covid-19

Open-source R projects categorized as covid-19 | Edit details

Top 6 R covid-19 Projects

  • GitHub repo Covid19Canada

    Epidemiological Data from the COVID-19 Epidemic in Canada

    Project mention: Daily Coronavirus cases in Canada vs % of Population Vaccinated [OC] | reddit.com/r/dataisbeautiful | 2021-06-16

    Source: Cases Vaccines

  • GitHub repo ODM

    Metadata and code to support covid-19 wastewater surveillance and open science. (by Big-Life-Lab)

    Project mention: COVID-19 update for March 29, 2021: Ottawa: 144, Province of Ontario: 2,336 new cases, 10 death(s), 1,477 resolved, 50,453 vaccinated. | reddit.com/r/ottawa | 2021-03-30

    The poop chart had four new data points added, but three of which were flagged for data concern.

  • Nanos

    Run Linux Software Faster and Safer than Linux with Unikernels.

  • GitHub repo covid19-nor-data

    Cleaned public data about Covid-19 in Norway

    Project mention: Oc Timeline Of Relative Spread Of Covid19 With | reddit.com/r/dataisbeautiful | 2021-02-26

    Norway: covid19-nor-data/municipality_and_district_wide.csv at master · thohan88/covid19-nor-data (github.com) also I think the deaths figures are somewhat derived from https://www.dagsavisen.no/nyheter/innenriks/oversikt-disse-er-dode-etter-koronasmitte-i-norge-1.1691241 at least in the beginning.

  • GitHub repo bc-covid-epi-rt

    A method to estimate Effective Reproductive Number (Rt) using the province of BC's case report data.

    Project mention: Reproductive Number (Rt) for BC, Dec 20, 2020: 0.88 (95% HDI: 0.75, 0.99) | reddit.com/r/vancouver | 2020-12-21

    Yep. It's right here.

  • GitHub repo vacccprogress

    Code for vacccprogress Twitter bot. Tweets daily COVID-19 Vaccination progress. Data taken from Our World In Data. .

    Project mention: Twitter bot in #rstats tweets out daily COVID-19 vaccination stats | reddit.com/r/rstats | 2021-05-20

    Here is the source code for the bot, powered by R and GitHub actions: https://github.com/favstats/vacccprogress/

  • GitHub repo covid19-flexdashboard

    A simple covid19-dashboard built with Flexdashboard

    Project mention: Any resources for dockerizing a flexdashboard? | reddit.com/r/Rlanguage | 2021-03-02
NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020). The latest post mention was on 2021-06-16.


What are some of the best open-source covid-19 projects in R? This list will help you:

Project Stars
1 Covid19Canada 310
2 ODM 24
3 covid19-nor-data 15
4 bc-covid-epi-rt 12
5 vacccprogress 5
6 covid19-flexdashboard 1
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