Top 13 Python Healthcare Projects

ERPNext

79 16,847 10.0 Python

Free and Open Source Enterprise Resource Planning (ERP)

Project mention: ERPNext: Free and Open Source Enterprise Resource Planning | news.ycombinator.com | 2023-10-07

Zato

3 1,070 9.9 Python

ESB, SOA, REST, APIs and Cloud Integrations in Python
InfluxDB

www.influxdata.com sponsored

Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
imbalanced-regression

1 757 1.8 Python

[ICML 2021, Long Talk] Delving into Deep Imbalanced Regression
MedCAT

1 407 8.5 Python

Medical Concept Annotation Tool
Cardea

1 113 4.4 Python

An open source automl library for using machine learning in healthcare.
nafas

6 95 0.0 Python

🧘‍♂️ Breathing Gymnastics Application
autoprognosis

2 87 5.0 Python

A system for automating the design of predictive modeling pipelines tailored for clinical prognosis.
WorkOS

workos.com sponsored

The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.
healthsea

1 84 3.2 Python

Healthsea is a spaCy pipeline for analyzing user reviews of supplementary products for their effects on health.
cyclops

3 65 9.3 Python

Toolkit for health AI implementation (by VectorInstitute)

Project mention: Call for open source devs to build the future of healthcare! | /r/github | 2023-06-30

FHIR-PYrate

1 51 5.9 Python

FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured information as pandas DataFrames. It can also be used to filter resources using RegEx and SpaCy and download DICOM studies and series.

Project mention: Converting XML files to dataframes. | /r/Julia | 2023-12-04

thinking specifically about fhir xml files and packages like FHIR-PYrate

pneumonia_detection

2 13 0.0 Python

Pneumonia Detection using machine learning - with PyTorch
MediChain

1 5 4.4 Python

A Consortium Blockchain for maintaining Patient Details across all of the hospitals of a country.
medprompt

1 0 4.1 Python

Collection of LLM prompts, tools, chains and agents for healthcare using LangChain & FHIR.

Project mention: Doctor interested in AI specifically how it will effect medicine - are there any good books to read on this? | /r/ArtificialInteligence | 2023-12-06

MedPrompt GitHub (note, not the medprompt from the first paper): https://github.com/dermatologist/medprompt

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020). The latest post mention was on 2023-12-06.

Python Healthcare related posts

Why Open Source?
5 projects | news.ycombinator.com | 21 Aug 2023
Help with resume! Just graduated (:
1 project | /r/dataengineering | 22 Dec 2022
AutoPrognosis: Automating the model selection for clinical prognosis
1 project | news.ycombinator.com | 4 Nov 2022

Index

What are some of the best open-source Healthcare projects in Python? This list will help you:

	Project	Stars
1	ERPNext	16,847
2	Zato	1,070
3	imbalanced-regression	757
4	MedCAT	407
5	Cardea	113
6	nafas	95
7	autoprognosis	87
8	healthsea	84
9	cyclops	65
10	FHIR-PYrate	51
11	pneumonia_detection	13
12	MediChain	5
13	medprompt	0