Nextflow rna-seq

Open-source Nextflow projects categorized as rna-seq | Edit details

Nextflow rna-seq Projects

  • GitHub repo rnaseq

    RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

    Project mention: Tkinter for python 3.10 broken on MacOS? | | 2021-10-07

    Not really sure why it's a problem for you, I'm working on rnaseq and they use a very big input dataset, also outputs huge datasets too. It uses docker so you can deploy fast on VMs.

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020). The latest post mention was on 2021-10-07.

Nextflow rna-seq related posts


Project Stars
1 rnaseq 397
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