Nextflow Pipelines

Open-source Nextflow projects categorized as Pipelines | Edit details

Nextflow Pipeline Projects

  • GitHub repo configs

    Config files used to define parameters specific to compute environments at different Institutions (by nf-core)

    Project mention: Why does it feels impossible to set up github nextflow pipeline without a root? | reddit.com/r/bioinformatics | 2021-07-07

    To pick a random example config file (https://github.com/nf-core/configs/blob/master/conf/cambridge.config) - they have specified that singularity should be used, that the cluster's job scheduler is slurm and the maximum memory/time/cpus.

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020). The latest post mention was on 2021-07-07.

Index

Project Stars
1 configs 37
Find remote jobs at our new job board 99remotejobs.com. There are 32 new remote jobs listed recently.
Are you hiring? Post a new remote job listing for free.
SaaSHub - Software Alternatives and Reviews
SaaSHub helps you find the best software and product alternatives
www.saashub.com