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Top 4 Nextflow Bioinformatic Projects
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sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
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configs
Config files used to define parameters specific to compute environments at different Institutions (by nf-core)
NOTE:
The open source projects on this list are ordered by number of github stars.
The number of mentions indicates repo mentiontions in the last 12 Months or
since we started tracking (Dec 2020).
The latest post mention was on 2023-04-29.
Nextflow Bioinformatics related posts
- Recommendations for software or online resources
- Best somatic variant callers?
- GATK4 automated pipelines in existence?
- Workflow Question
- Why does it feels impossible to set up github nextflow pipeline without a root?
- aws batch keeps the "Desired vCPUs" high long after they should be reduced
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A note from our sponsor - WorkOS
workos.com | 17 Apr 2024
Index
What are some of the best open-source Bioinformatic projects in Nextflow? This list will help you:
Project | Stars | |
---|---|---|
1 | sarek | 332 |
2 | mag | 182 |
3 | eager | 124 |
4 | configs | 77 |
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