seq VS megahit

Compare seq vs megahit and see what are their differences.

seq

A high-performance, Pythonic language for bioinformatics (by seq-lang)

megahit

Ultra-fast and memory-efficient (meta-)genome assembler (by voutcn)
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seq megahit
15 1
634 550
- -
0.7 0.0
over 1 year ago about 2 months ago
C++ C++
Apache License 2.0 GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

seq

Posts with mentions or reviews of seq. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2021-09-20.

megahit

Posts with mentions or reviews of megahit. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning megahit yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing seq and megahit you can also consider the following projects:

Nim - Nim is a statically typed compiled systems programming language. It combines successful concepts from mature languages like Python, Ada and Modula. Its design focuses on efficiency, expressiveness, and elegance (in that order of priority).

adam - ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

edlib - Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

wyng-backup - Fast Time Machine-like backups for logical volumes & disk images

bowtie2 - A fast and sensitive gapped read aligner

Biopython - Official git repository for Biopython (originally converted from CVS)

seq-genomics - Coursera Bioinformatics / Stepik Genome Sequencing with seq-lang

poly - A Go package for engineering organisms.

qore - Qore Programming Language

bioconda-recipes - Conda recipes for the bioconda channel.

TensorComprehensions - A domain specific language to express machine learning workloads.