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Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
seq
- Bioinformatics programming language
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A Python-based programming language for high-performance computational genomics
> Seq is a Python-compatible language, and the vast majority of Python programs should work without any modifications
https://github.com/seq-lang/seq
- Seq – A programming language for computational genomics and bioinformatics
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Hacker News top posts: Sep 15, 2021
Seq: A programming language for high-performance computational genomics\ (17 comments)
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Seq: A programming language for high-performance computational genomics
They support both, and will deprecate Python 2 style soon.
https://github.com/seq-lang/seq/issues/223
gitlab
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Gitlab Duo
Since the relevant code appears to be in the "ee" directory <https://gitlab.com/gitlab-org/gitlab/-/blob/v16.11.0-ee/ee/l...> and is not present in the foss repo, I'm guessing the answer is no, at least for now. They do have a history of "releasing" features from EE back to CE but my suspicion is not for LLM stuff
- Code Search Is Hard
- XZ Backdoor Investigation Request to Gitlab Team
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Client side Git hooks 101
(Side note: Issues are usually hash-prefixed like #1234 both on GitLab and GitHub. However, commit messages must not begin with a hash, they would be considered a comment and ignored. Therefore, GitHub has introduced the alternative prefix GH- and I've contributed a similar prefix GL- to GitLab a while ago.)
- Assign Issue to an AI Developer
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BuildKit in depth: Docker's build engine explained
and its "oh, you want multi-arch, do you?" friend. While prosecuting this <https://gitlab.com/gitlab-org/gitlab/-/issues/339567> I learned that https://hub.docker.com/layers/multiarch/qemu-user-static/7.2... actually mutates the binfmt_misc in buildx's context in order to exec the static copy of qemu in it https://github.com/multiarch/qemu-user-static/blob/v7.2.0-1/...
and, that the buildx plugin itself has some qemu magick in it, which got addressed in a minor version bump but I couldn't track down the relevant GitHub issue this second (I've flushed it from my mind, only recalling that there were a lot of actors in that tire fire)
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Gitlab password reset bug leaves more than 5.3K servers up for grabs
This is actually a follow-up refactor, the fix is here: https://gitlab.com/gitlab-org/gitlab/-/commit/abe79e4ec43798...
- ExifTool CVE-2021-22204 – Arbitrary Code Execution
- Critical Gitlab vulnerability exposes 2FA-less users to account takeovers
- Upcoming critical Gitlab security issue
What are some alternatives?
Nim - Nim is a statically typed compiled systems programming language. It combines successful concepts from mature languages like Python, Ada and Modula. Its design focuses on efficiency, expressiveness, and elegance (in that order of priority).
Gitea - Git with a cup of tea! Painless self-hosted all-in-one software development service, including Git hosting, code review, team collaboration, package registry and CI/CD
adam - ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.
Harbor - An open source trusted cloud native registry project that stores, signs, and scans content.
edlib - Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
onedev - Git Server with CI/CD, Kanban, and Packages. Seamless integration. Unparalleled experience.
wyng-backup - Fast Time Machine-like backups for logical volumes & disk images
rich-markdown-editor - The open source React and Prosemirror based markdown editor that powers Outline. Want to try it out? Create an account:
Biopython - Official git repository for Biopython (originally converted from CVS)
gitlab-foss
bowtie2 - A fast and sensitive gapped read aligner
chatwoot - Open-source live-chat, email support, omni-channel desk. An alternative to Intercom, Zendesk, Salesforce Service Cloud etc. 🔥💬