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Rust-Bio Alternatives
Similar projects and alternatives to Rust-Bio
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tauri
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InfluxDB
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aircraft
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WorkOS
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RG3D
Discontinued 3D and 2D game engine written in Rust [Moved to: https://github.com/FyroxEngine/Fyrox]
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talent-plan
open source training courses about distributed database and distributed systems
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Plume
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clickhouse-rs
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NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better Rust-Bio alternative or higher similarity.
Rust-Bio reviews and mentions
Posts with mentions or reviews of Rust-Bio.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-01-01.
- Bioinformatics Data Structures in Rust
- Bioinformatics with Rust
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bioinformatic libraries and zig?
Does anyone know of zig native libraries for bioinformatics (here is a Rust example https://rust-bio.github.io/ )? It seems as though one could pull in a lot of bioinformatics C libraries such as done with https://github.com/brentp/hts-zig.
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Proteomics search engine written in Rust
e.g. Rust-Bio
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What are your top 3-5 programming languages and why?
I would start with the book and then rust-bio library. Rust is a pretty low level language compared to R/Python. It’s an especially good fit for writing efficient tools that make use of the kinds of algorithms / data structures that are implemented in rust-bio.
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I have to admit. The free code camp course is a bit more sparing than I would have preferred. How did everyone learn Rust?
Absolutely! It already is, e.g., https://github.com/rust-bio/rust-bio. I'm moving from the academia/nonprofit world into industry bioinformatics, and I intend to use Rust as much as possible. I've already replaced as much of my Python as possible with Rust. I feel I'm able to create larger, more complex programs with Rust because I have the compiler to keep me from making common mistakes that are so easy to make in dynamically typed languages like Perl and Python. It might take longer to write a program initially, but I've started to create a library of functions I can paste together to do things like parse a positive integer, find a bunch of files with a certain file extension, search through data for a pattern, parse CSV files, etc. Writing my latest book has provided even more common patterns I keep finding I use over and over.
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Is learning Rust and systems programming through the books Rust in Action and Crafting Interpreters a good idea?
I think there is huge potential for Rust in bioinformatics, and there are already some great projects like https://rust-bio.github.io/. It seems industry is also hiring for these skills. This Nature article is a little old, but also covers why people in the field are looking for greater safety and performance. It's relatively easy to write a Python program to do bio stuff, but it's also very easy to get lots of things wrong or for the resulting program to be slow and/or impossible to extend and maintain. In the long run, I think it makes sense to write in Rust. Perl was king in biofx when I started, and I would not have predicted it being displaced by Python, so there's good reason to believe that Python may one day be eclipsed by Rust.
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Whats your favourite open source Rust project that needs more recognition?
Well, someone mentioned https://rust-bio.github.io/
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How can one make Rust excel in the Sciences
So generally stuff in this maths/numerical space. The term is a bit deceptive because it rarely means domain-specific science libraries like rust-bio even thought that might be what you think when you hear "scientific computing".
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www.saashub.com | 18 Apr 2024
Stats
Basic Rust-Bio repo stats
9
1,494
6.7
11 days ago
rust-bio/rust-bio is an open source project licensed under MIT License which is an OSI approved license.
The primary programming language of Rust-Bio is Rust.
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