rnaseq-nf VS sarek

Compare rnaseq-nf vs sarek and see what are their differences.

rnaseq-nf

A proof of concept of RNAseq pipeline (by nextflow-io)
Our great sponsors
  • InfluxDB - Power Real-Time Data Analytics at Scale
  • WorkOS - The modern identity platform for B2B SaaS
  • SaaSHub - Software Alternatives and Reviews
rnaseq-nf sarek
1 5
61 331
- 7.9%
5.8 9.8
5 days ago 7 days ago
Nextflow Nextflow
Mozilla Public License 2.0 MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

rnaseq-nf

Posts with mentions or reviews of rnaseq-nf. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning rnaseq-nf yet.
Tracking mentions began in Dec 2020.

sarek

Posts with mentions or reviews of sarek. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-03-11.

What are some alternatives?

When comparing rnaseq-nf and sarek you can also consider the following projects:

GATK - Germline Variant Calling Nextflow Pipeline Based On GATK4 Best Practices

galaxy - Data intensive science for everyone.

rnatoy - A proof of concept RNA-Seq pipeline with Nextflow

mag - Assembly and binning of metagenomes

configs - Config files used to define parameters specific to compute environments at different Institutions

patterns - A curated collection of Nextflow implementation patterns

eager - A fully reproducible and state-of-the-art ancient DNA analysis pipeline

rnaseq - RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

chipseq - ChIP-seq peak-calling, QC and differential analysis pipeline.

rare-disease-wf - (WIP) best-practices workflow for rare disease