rnaseq-nf
patterns
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rnaseq-nf | patterns | |
---|---|---|
1 | 1 | |
61 | 314 | |
- | 1.0% | |
5.8 | 4.5 | |
5 days ago | 4 months ago | |
Nextflow | Nextflow | |
Mozilla Public License 2.0 | MIT License |
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rnaseq-nf
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Tracking mentions began in Dec 2020.
patterns
We haven't tracked posts mentioning patterns yet.
Tracking mentions began in Dec 2020.
What are some alternatives?
rnatoy - A proof of concept RNA-Seq pipeline with Nextflow
sarek - Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
rnaseq - RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
eager - A fully reproducible and state-of-the-art ancient DNA analysis pipeline
rare-disease-wf - (WIP) best-practices workflow for rare disease
configs - Config files used to define parameters specific to compute environments at different Institutions
atacseq - ATAC-seq peak-calling and QC analysis pipeline
mag - Assembly and binning of metagenomes
chipseq - ChIP-seq peak-calling, QC and differential analysis pipeline.