pyCircos VS plasmidviewer

Compare pyCircos vs plasmidviewer and see what are their differences.

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pyCircos plasmidviewer
5 1
348 22
1.7% -
3.1 3.2
8 months ago about 3 years ago
Python Python
GNU General Public License v3.0 only GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

pyCircos

Posts with mentions or reviews of pyCircos. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-07-21.

plasmidviewer

Posts with mentions or reviews of plasmidviewer. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-04-02.
  • Beautiful circos plots in Python
    2 projects | /r/Python | 2 Apr 2022
    Thank you for using pyCircos!. As you mentioned, the current label placement function has a lot of room for improvement. Now, I plan to apply the function of the other library, which I'm developing to develop the optimal label placement function that prevents label overlapping. Also, legend rendering is one of the most unusable functions in matplotlib, and I have yet to come up with an implementation of the legend function with high user accessibility.

What are some alternatives?

When comparing pyCircos and plasmidviewer you can also consider the following projects:

itermplot - An awesome iTerm2 backend for Matplotlib, so you can plot directly in your terminal.

pyCirclize - Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

patchworklib - Patchwork for matplotlib: A subplot manager for intuitive layouts in matplotlib, seaborn, and plotnine.

graphlan - High-quality circular representations of taxonomic and phylogenetic trees

phylophlan - Precise phylogenetic analysis of microbial isolates and genomes from metagenomes

ielex-data-and-tree - Data and scripts for producing a Baysian phylogenetic tree sample of for the Indo-European family which is "good enough", using data from IELex (Dunn et al. 2011).

IP-Link - Visualizing the relationships between different IP from network traffic capture.

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