ncem VS PDN

Compare ncem vs PDN and see what are their differences.

ncem

Learning cell communication from spatial graphs of cells (by theislab)
Tensorflow Gnn Glm cvae encoder-decoder-model scanpy squidpy cell-cell-communication cell-cell-interaction
Source Code
ncem.readthedocs.io
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PDN

The official PyTorch implementation of "Pathfinder Discovery Networks for Neural Message Passing" (WebConf '21) (by benedekrozemberczki)
Gcn Gnn Deepwalk Multiplex Graph2vec Pytorch graph-neural-network Deep Learning pathfinder message-passing neural-message-passing cheminformatics molecules graph-classification node-classification network-science Data Science Transformer Bert gpt-3
Source Code
arxiv.org
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ncem PDN
1 1
96 57
- -
6.2 0.0
3 months ago about 1 year ago
Python Python
BSD 3-clause "New" or "Revised" License GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

ncem

Posts with mentions or reviews of ncem. We have used some of these posts to build our list of alternatives and similar projects.

PDN

Posts with mentions or reviews of PDN. We have used some of these posts to build our list of alternatives and similar projects.

What are some alternatives?

When comparing ncem and PDN you can also consider the following projects:

gnn - TensorFlow GNN is a library to build Graph Neural Networks on the TensorFlow platform.

awesome-graph-classification - A collection of important graph embedding, classification and representation learning papers with implementations.

pytorch-lightning - Build high-performance AI models with PyTorch Lightning (organized PyTorch). Deploy models with Lightning Apps (organized Python to build end-to-end ML systems). [Moved to: https://github.com/Lightning-AI/lightning]

gnn-lspe - Source code for GNN-LSPE (Graph Neural Networks with Learnable Structural and Positional Representations), ICLR 2022

karateclub - Karate Club: An API Oriented Open-source Python Framework for Unsupervised Learning on Graphs (CIKM 2020)

best-of-ml-python - 🏆 A ranked list of awesome machine learning Python libraries. Updated weekly.

pytorch_geometric_temporal - PyTorch Geometric Temporal: Spatiotemporal Signal Processing with Neural Machine Learning Models (CIKM 2021)

awesome-drug-pair-scoring - Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)

GraphGPS - Recipe for a General, Powerful, Scalable Graph Transformer

diffnet - Graph Neural Network based Social Recommendation Model. SIGIR2019.

ScaffoldGraph - ScaffoldGraph is an open-source cheminformatics library, built using RDKit and NetworkX, for the generation and analysis of scaffold networks and scaffold trees.

ncem vs gnn PDN vs awesome-graph-classification PDN vs gnn PDN vs pytorch-lightning PDN vs gnn-lspe PDN vs karateclub PDN vs best-of-ml-python PDN vs pytorch_geometric_temporal PDN vs awesome-drug-pair-scoring PDN vs GraphGPS PDN vs diffnet PDN vs ScaffoldGraph