mag VS atlas

Compare mag vs atlas and see what are their differences.

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mag atlas
2 67
182 4,903
4.4% 5.6%
9.5 9.8
24 days ago 7 days ago
Nextflow Go
MIT License Apache License 2.0
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

mag

Posts with mentions or reviews of mag. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-07-16.
  • How do you use Termux?
    3 projects | /r/termux | 16 Jul 2022
    So, I'm a bioinformatician, and currently I am extending my company's data processing pipeline which takes metagenomic sequencing data and performs a number of downstream analyses on it, the results of which are then provided to our customers. Here is an example of such a data processing pipeline: it's a script which orchestrates the execution of a number of tools to get the desired end result. Each of the green bubbles in the flowchart represents a single program which needs to be called specific settings and with data provided to it either by me (as the pipeline input) or from outputs of previous steps in the pipeline.
  • Is it possible to assemble a complete bacterial genome using short reads?
    2 projects | /r/bioinformatics | 9 Aug 2021

atlas

Posts with mentions or reviews of atlas. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-10-03.

What are some alternatives?

When comparing mag and atlas you can also consider the following projects:

SqueezeMeta - A complete pipeline for metagenomic analysis

datahub - The Metadata Platform for your Data Stack

nextflow - A DSL for data-driven computational pipelines

migrate - Database migrations. CLI and Golang library.

rnaseq - RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

sqlc - Generate type-safe code from SQL

spades - SPAdes Genome Assembler

InfluxDB - Scalable datastore for metrics, events, and real-time analytics

sarek - Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

skeema - Declarative pure-SQL schema management for MySQL and MariaDB

eager - A fully reproducible and state-of-the-art ancient DNA analysis pipeline

pogreb - Embedded key-value store for read-heavy workloads written in Go