kana vs pagoda2

kana

Single cell analysis in the browser (by jkanche)

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jkanche.com

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pagoda2

R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets (by kharchenkolab)

single-cell Transcriptomics scrna-seq single-cell-rna-seq

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kana		pagoda2
	Project
2	Mentions	2
3	Stars	190
-	Growth	5.3%
1.7	Activity	5.3
about 1 year ago	Latest Commit	about 2 months ago
JavaScript	Language	JavaScript
MIT License	License	-

The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

kana

Posts with mentions or reviews of kana. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-11-21.

Ask HN: What weird technical scene are you fond/part of?
25 projects | news.ycombinator.com | 21 Nov 2022

usig modern web technologies to develop high performance scientific applications. We built a highly optimized, interactive and exploratory application for single-cell data analysis[1]. it runs purely in the browser with no backend and scales upto 200K cells. similar efforts include the biowasm project [2].
[1] https://github.com/jkanche/kana
Kana: Single Cell RNA-Sequencing Analysis in the Browser
1 project | news.ycombinator.com | 7 Mar 2022

pagoda2

Posts with mentions or reviews of pagoda2. We have used some of these posts to build our list of alternatives and similar projects.

GOterm analysis in Seurat
1 project | /r/bioinformatics | 6 Aug 2022

Try pagoda2 for this: https://github.com/kharchenkolab/pagoda2
Seurat Vs Pagoda2 For Scrnaseq Analysis
1 project | /r/bioinformatics | 4 Jan 2021

I realize that this is a bit old, but I find pagoda2 faster: https://github.com/kharchenkolab/pagoda2

What are some alternatives?

When comparing kana and pagoda2 you can also consider the following projects:

SVM-Face-and-Object-Detection-Shader - SVM using HOG descriptors implemented in fragment shaders

seurat - R toolkit for single cell genomics

FreePSXBoot - Exploit to allow loading arbitrary code on the PSX using only a memory card (no game needed)

scanpy - Single-cell analysis in Python. Scales to >1M cells.

AdGuardMV3 - AdGuard browser extension prototype based on the new Manifest V3

alevin-fry - 🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.

new-wave - Stack Computer Bytecode Interpreters: The New Wave

too-many-cells - Cluster single cells and analyze cell clade relationships with colorful visualizations.

TablaM - The practical relational programing language for data-oriented applications

example-chrome-extension - Example Chrome Extension - open source examples for Chrome extension APIs

model-synthesis - Model synthesis is a technique for generating 2D and 3D shapes from examples.

sandspiel - Creative cellular automata browser game