seqloc VS ViennaRNAParser

Compare seqloc vs ViennaRNAParser and see what are their differences.

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seqloc ViennaRNAParser
0 0
4 3
- -
0.0 0.0
about 7 years ago about 5 years ago
Haskell Haskell
MIT License GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

seqloc

Posts with mentions or reviews of seqloc. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning seqloc yet.
Tracking mentions began in Dec 2020.

ViennaRNAParser

Posts with mentions or reviews of ViennaRNAParser. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning ViennaRNAParser yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing seqloc and ViennaRNAParser you can also consider the following projects:

FormalGrammars - Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)

hPDB - PDB parser in Haskell

Forestry - Science and craft of forests

phybin - Binning (Newick) Phylogenetic Trees by Topology

BioHMM - Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format.

RNAlien - RNAlien - unsupervised RNA family model construction

BlastHTTP - Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice

MutationOrder - most likely order of mutation events in RNA

TaxonomyTools - Tools to process and visualize NCBI taxonomy data

ClustalParser - Parse output of Clustal tools

samtools - [Moved to: https://github.com/ingolia/SamTools]

cmv - Visualize HMMs, CMs and their comparisons