heatitup
too-many-cells
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| heatitup | too-many-cells | |
|---|---|---|
| - | - | |
| - | 99 | |
| - | - | |
| - | 4.5 | |
| - | 5 months ago | |
| Haskell | ||
| GNU General Public License v3.0 only | GNU General Public License v3.0 only |
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heatitup
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Tracking mentions began in Dec 2020.
too-many-cells
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Tracking mentions began in Dec 2020.
What are some alternatives?
heatitup-complete - Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.
subsample - Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples.
hyraxAbif - ABIF parser, writer and generator
collapse-duplication - Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations.
integreat - Integrate difference data sources and optionally perform differential integration.
birch-beer - Generate a tree for displaying a hierarchy of groups with colors, scaling, and more.
normalize - normalize
tex-join-bib - Compile separate tex files with the same bibliography.
BiobaseEnsembl - Ensembl related functions and datastructures