heatitup-complete VS birch-beer

Compare heatitup-complete vs birch-beer and see what are their differences.

heatitup-complete

Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly. (by GregorySchwartz)
Bioinformatics Heatitup
Source Code
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birch-beer

Generate a tree for displaying a hierarchy of groups with colors, scaling, and more. (by GregorySchwartz)
Bioinformatics
Source Code
gregoryschwartz.github.io
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heatitup-complete birch-beer
- -
0 6
- -
0.0 0.0
about 4 years ago over 1 year ago
Haskell Haskell
GNU General Public License v3.0 only GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
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heatitup-complete

Posts with mentions or reviews of heatitup-complete. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning heatitup-complete yet.
Tracking mentions began in Dec 2020.

birch-beer

Posts with mentions or reviews of birch-beer. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning birch-beer yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing heatitup-complete and birch-beer you can also consider the following projects:

heatitup

subsample - Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples.

too-many-cells - Cluster single cells and analyze cell clade relationships with colorful visualizations.

hyraxAbif - ABIF parser, writer and generator

hierarchical-spectral-clustering - Hierarchical spectral clustering of a graph.

normalize - normalize

tex-join-bib - Compile separate tex files with the same bibliography.

EntrezHTTP - Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice

collapse-duplication - Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations.

integreat - Integrate difference data sources and optionally perform differential integration.

BiobaseEnsembl - Ensembl related functions and datastructures

heatitup-complete vs heatitup birch-beer vs subsample heatitup-complete vs too-many-cells birch-beer vs hyraxAbif heatitup-complete vs hierarchical-spectral-clustering birch-beer vs normalize heatitup-complete vs tex-join-bib birch-beer vs EntrezHTTP heatitup-complete vs normalize birch-beer vs collapse-duplication heatitup-complete vs integreat birch-beer vs BiobaseEnsembl