phantasm
PHANTASM: PHylogenomic ANalyses for the TAxonomy and Systematics of Microbes (by dr-joe-wirth)
seurat-docker
Docker images of Seurat (by satijalab)
| phantasm | seurat-docker | |
|---|---|---|
| 2 | 1 | |
| 24 | 8 | |
| - | - | |
| 8.6 | 7.3 | |
| over 1 year ago | 4 months ago | |
| Python | Dockerfile | |
| MIT License | - |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
phantasm
Posts with mentions or reviews of phantasm.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-04-02.
- Is there any way to easily create a docker image that has both python and R?
-
PHANTASM: new software for microbial taxonomy
The easiest way to try it out PHANTASM is to use the Docker image. The source code is also available on github.
seurat-docker
Posts with mentions or reviews of seurat-docker.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-04-02.
-
Is there any way to easily create a docker image that has both python and R?
Also maybe relevant: the dockerfile https://github.com/satijalab/seurat-docker/blob/master/latest/Dockerfile
What are some alternatives?
When comparing phantasm and seurat-docker you can also consider the following projects:
GTDBTk - GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
scarches - Reference mapping for single-cell genomics
drep - Rapid comparison and dereplication of genomes
gEAR - The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Seq and more.
pyani - Application and Python module for average nucleotide identity analyses of microbes.
vulhub - Pre-Built Vulnerable Environments Based on Docker-Compose