dcm2niix VS brainflow

Compare dcm2niix vs brainflow and see what are their differences.

Our great sponsors
  • WorkOS - The modern identity platform for B2B SaaS
  • InfluxDB - Power Real-Time Data Analytics at Scale
  • SaaSHub - Software Alternatives and Reviews
dcm2niix brainflow
6 13
798 1,197
3.6% 2.3%
7.8 8.2
2 days ago 5 days ago
C++ C++
GNU General Public License v3.0 or later MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

dcm2niix

Posts with mentions or reviews of dcm2niix. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-02-25.
  • I have a doubt in brain MRI scan
    3 projects | /r/MRI | 25 Feb 2023
    Keep in mind that DICOM images are always converted to the NIfTI format when dealing with neuroimaging data, so the different software are expecting this image type. You should always keep the original DICOM files in your archive, but convert them to NIfTI and use that as your raw data input. To convert DICOM to NIfTI, you can use a tool like dcm2niix dcm2niix.
  • Conversion of DICOM to .nii.gz
    2 projects | /r/MRI | 17 Nov 2021
    When I try to execute the .exe in the link you have provided the program does not run. However, according to this site: https://github.com/rordenlab/dcm2niix! the niix is included in MRIcroGL which I have tried.
  • Can somebody help me quantify spatial resolution in CT scans of mice?
    1 project | /r/bioinformatics | 29 Apr 2021
    The spatial resolution of the scan is typically in the DICOM header, isn't it? Maybe try running the DICOM through something like dcm2niix (https://github.com/rordenlab/dcm2niix) which will convert to a NIFTI formatted image and generate a JSON file from the header. The header support isn't complete, so it might not get things correct from your CT image (or from an animal scanner for that matter), but it's worth a shot. I imagine there are similar tools for CT.
  • Full-size 3D print of my brain
    3 projects | /r/3Dprinting | 27 Mar 2021
  • Convert DICOM Slices to Nifti Using Nibabel(Python)
    1 project | /r/neuro | 10 Mar 2021

brainflow

Posts with mentions or reviews of brainflow. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-03-01.
  • Code recommendations for the MUSE 2 using Python
    2 projects | /r/BCI | 1 Mar 2023
  • Want to know how to Get Started with BCI
    1 project | /r/BCI | 30 Jan 2023
  • Show HN: BrainFlow the library to work with biosensors and neurointerfaces
    1 project | /r/hypeurls | 13 Sep 2022
    1 project | news.ycombinator.com | 12 Sep 2022
  • 100k downloads from PyPI for my home project BrainFlow
    1 project | /r/Python | 25 May 2022
    The home project I've been working on for 4 years (https://github.com/brainflow-dev/brainflow) has been downloaded 100k times from PyPI. It's a library to work with wearable devices, with primary focus on EEG.
  • SimpleBLE - Cross-platform BLE library for Windows, Linux and MacOS/iOS
    8 projects | /r/cpp | 4 Apr 2022
    About my current user base, I'd like to highlight we use SimpleBLE at my job, it has been integrated into BrainFlow, it is part of some new tools made by a large industrial automation company (whose name I cannot mention but rhymes with "Good product made by bees") and by a robot researcher in Germany.
  • Develop apps with biosensors and neurointerfaces
    2 projects | dev.to | 30 Nov 2021
    BrainFlow provides a uniform SDK to work with biosensors with a primary focus on neurointerfaces. It provides SDK for Python, Java, C#, C++, Matlab, R, Julia and Rust. Core part of BrainFlow is written in C\C++ and all bindings call methods from dynamic library. User API is uniform for all supported devices and allows you to develop device agnostic applications.
  • A real brain-computer interface mod for Skyrim VR
    1 project | /r/Games | 16 Nov 2021
    I made a mod for Skyrim VR that brings your mental focus level (as determined by a Muse 2 meditation EEG device and the processing of https://brainflow.org) into Skyrim and scales your ingame magic power by your actual mental power. So you now actually need to learn to channel your inner strength if you want to be a successful mage! This is Real Virtual Magic!
  • A real brain-computer interface mod for Skyrim VR!
    1 project | /r/skyrimvr | 15 Nov 2021
    I can get the complete EEG reading of four channels plus the gyro sensors and in the future also the heart rate. What I do with it is a different question :D I process the data myself, locally, using the brainflow.org library. So I do create a non-binary value at the moment
  • Truly next level s**t here
    1 project | /r/skyrimmods | 15 Nov 2021
    Sure! I use brainflow.org to collect the data from the muse and at the moment I just do a super simple spectral analysis and use the average alpha/theta ratio to determine brain power. This will definitely not stay. I am already experimenting with different ratios and I will probably implement a classifier that allows a more sophisticated classification later down the road. I will also augment it with the gyro sensor and the heart rate monitor that is integrated in the Muse. Ultimately, I will make it compatible with the OpenBCI Galea device. Join the discord to stay in touch!

What are some alternatives?

When comparing dcm2niix and brainflow you can also consider the following projects:

jpeg-autorotate - 📸 Node module to rotate JPEG images based on EXIF orientation.

BioAmp-EXG-Pill - BioAmp EXG Pill is a small and elegant Analog Front End (AFE) board for BioPotential signal acquisition.

gdl - GDL - GNU Data Language

NeuroGloves - Using the Myo to play VR games using SteamVR

MRIcroGL - v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.

audiowmark - Audio Watermarking

DicomToMesh - A command line tool to transform a DICOM volume into a 3d surface mesh (obj, stl or ply). Several mesh processing routines can be enabled, such as mesh reduction, smoothing or cleaning. Works on Linux, OSX and Windows.

gnss-sdr - GNSS-SDR, an open-source software-defined GNSS receiver

simnibs - Simulation of Non-Invasive Brain Stimulation

ironbci - Open-Source Brain-Computer Interface, ADS1299 and STM32

ESP32-targz - 🗜️ An Arduino library to unpack/uncompress tar, gz, and tar.gz files on ESP32 and ESP8266

Kilosort - Fast spike sorting with drift correction for up to a thousand channels