bracken_plot
A Shiny app for taxonomic abundance visualization (by acvill)
shinyjs
💡 Easily improve the user experience of your Shiny apps in seconds (by daattali)
| bracken_plot | shinyjs | |
|---|---|---|
| 2 | 3 | |
| 7 | 740 | |
| - | -0.1% | |
| 5.9 | 5.6 | |
| 12 months ago | 13 days ago | |
| R | R | |
| MIT License | GNU General Public License v3.0 or later |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
bracken_plot
Posts with mentions or reviews of bracken_plot.
We have used some of these posts to build our list of alternatives
and similar projects.
- analysis of kraken2 reports
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Looking for some resources on creating a graph like this. Or the name of a graph like this so I can look up specific resources for R. :)
These are commonly called stacked bar plots or taxa relative abundance plots. You frequently see these plots in microbiome research papers where the authors performed either 16S or metagenomic sequencing. Given the type of data you have, you can use tools that are already available. Take a look at the R source code for this tool, which includes features like color palette recycling and grouping of taxa below a minimum abundance threshold into an “other” category.
shinyjs
Posts with mentions or reviews of shinyjs.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-03-16.
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[Shiny Dashboard] [R6] Dynamic Value boxes - having only one display.
Also, if you want to show/hide a box depending on a parameter, you can observe whether the parameter is present or not, then simply show/hide the box with the shinyjs package.
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Shiny app which Uploads a datafile and create a checkbox and textinput and dropdown list for each column
Have a look at shinyjs. https://deanattali.com/shinyjs/ https://github.com/daattali/shinyjs#overview-main There you can specify which blocks of ui are hidden from the start, you can enable and disable inputs, show and hide, and much more.
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Load Testing Shiny Apps
Shiny is an R package that makes it easy to build interactive web apps straight from R. You can host standalone apps on a webpage or embed them in R Markdown documents or build dashboards. You can also extend your Shiny apps with CSS themes, htmlwidgets, and JavaScript actions.
What are some alternatives?
When comparing bracken_plot and shinyjs you can also consider the following projects:
timevis - 📅 Create interactive timeline visualizations in R
JuliaConnectoR - A functionally oriented interface for calling Julia from R
electricShine - Create Standalone Installable Shiny Apps
shinyalert - 🗯️ Easily create pretty popup messages (modals) in Shiny
regexplain - 🔍 An RStudio addin slash regex utility belt
tidymodules - An Object-Oriented approach to Shiny modules