biobakery_workflows
dndserver

biobakery_workflows | dndserver | |
---|---|---|
1 | 1 | |
106 | 270 | |
0.0% | 0.0% | |
4.6 | 7.9 | |
20 days ago | over 1 year ago | |
Python | Python | |
GNU General Public License v3.0 or later | The Unlicense |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
biobakery_workflows
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Any good meta-transcriptomics pipelines
The bio bakery has some meta-transcriptomic pipelines on it. They also maintain the mertaphlan and humann packages that are almost becoming the defacto standard when analysing shot gun reads. https://github.com/biobakery/biobakery_workflows
dndserver
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Fooling around in an early private server implementation
Python: https://github.com/Snaacky/dndserver/ (this one also has a Discord server)
What are some alternatives?
sourmash - Quickly search, compare, and analyze genomic and metagenomic data sets.
OpenAthena-Legacy-Python - OpenAthena allows common drones to spot precise geodetic locations
GEMAP_NCLDV - Genome Mapping Analysis Pipeline for giant viruses
amazing-core - Open Source solution for Amazing World
graphlan - High-quality circular representations of taxonomic and phylogenetic trees
mwatoi - Android to iOS WhatsApp Transferrer
DB-GPT - AI Native Data App Development framework with AWEL(Agentic Workflow Expression Language) and Agents
Instagram-API - Instagram's private API (need help getting to v1.6 on the PHP side)
kneaddata - Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.
py-kms - KMS Server Emulator written in Python
