ViennaRNAParser vs phybin

ViennaRNAParser

By eggzilla

Specific Industries Bioinformatics

Source Code

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phybin

Binning (Newick) Phylogenetic Trees by Topology (by rrnewton)

Specific Industries Bioinformatics

Source Code

people.csail.mit.edu

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ViennaRNAParser		phybin
	Project
-	Mentions	-
3	Stars	8
-	Growth	-
0.0	Activity	0.0
over 6 years ago	Latest Commit	about 5 years ago
Haskell	Language	Haskell
GNU General Public License v3.0 only	License	BSD 3-clause "New" or "Revised" License

The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

ViennaRNAParser

Posts with mentions or reviews of ViennaRNAParser. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning ViennaRNAParser yet.
Tracking mentions began in Dec 2020.

phybin

Posts with mentions or reviews of phybin. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning phybin yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing ViennaRNAParser and phybin you can also consider the following projects:

FormalGrammars - Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)

BlastHTTP - Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice

hPDB - PDB parser in Haskell

ADPfusionForest - Dynamic programming on tree and forest structures

BioHMM - Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format.

Taxonomy - Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation for the NCBI (National Center for Biotechnology Information) Taxonomy datasources.

Forestry - Science and craft of forests

cobot-tools

RNAlien - RNAlien - unsupervised RNA family model construction

mmtf - MMTF for Haskell