StockholmAlignment VS samtools

Compare StockholmAlignment vs samtools and see what are their differences.

StockholmAlignment

Libary containing parsing and visualisation functions and datastructures for Stockholm aligmnent format. (by eggzilla)
Specific Industries Bioinformatics
Source Code
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samtools

[Moved to: https://github.com/ingolia/SamTools] (by ingolia)
Specific Industries Bioinformatics Samtools

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StockholmAlignment samtools
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3 10
- -
0.0 0.0
over 4 years ago almost 8 years ago
Haskell C
GNU General Public License v3.0 only MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

StockholmAlignment

Posts with mentions or reviews of StockholmAlignment. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning StockholmAlignment yet.
Tracking mentions began in Dec 2020.

samtools

Posts with mentions or reviews of samtools. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning samtools yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing StockholmAlignment and samtools you can also consider the following projects:

MutationOrder - most likely order of mutation events in RNA

Genbank - Genbank format tools and parser

ViennaRNAParser

Gene-CluEDO - Gene Cluster Evolution Determined Order

seqtk - Toolkit for processing sequences in FASTA/Q formats

vcf - Haskell library to handle VCF (Variant Call Format) files

libdna - ♥ Essential Functions for DNA Manipulation

BioHMM - Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format.

RNAlien - RNAlien - unsupervised RNA family model construction

bio-sequence

phybin - Binning (Newick) Phylogenetic Trees by Topology

StockholmAlignment vs MutationOrder samtools vs Genbank StockholmAlignment vs ViennaRNAParser samtools vs ViennaRNAParser StockholmAlignment vs Gene-CluEDO samtools vs seqtk StockholmAlignment vs vcf samtools vs libdna StockholmAlignment vs BioHMM samtools vs RNAlien StockholmAlignment vs bio-sequence samtools vs phybin