PheKnowLator VS topic-db

Compare PheKnowLator vs topic-db and see what are their differences.

PheKnowLator

PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models (by callahantiff)

topic-db

TopicDB is a topic maps-based semantic graph store (using SQLite for persistence) (by brettkromkamp)
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PheKnowLator topic-db
1 1
123 247
- -
7.0 2.8
4 months ago 8 months ago
Python Python
Apache License 2.0 MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

PheKnowLator

Posts with mentions or reviews of PheKnowLator. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2021-11-09.

topic-db

Posts with mentions or reviews of topic-db. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2021-06-10.
  • Contextualise: Structured Thinking
    2 projects | /r/Python | 10 Jun 2021
    Contextualise is a simple but effective tool particularly suited for organising information-heavy projects and activities consisting of unstructured and widely diverse data and information resources: https://github.com/brettkromkamp/contextualise. Contextualise's main dependency is TopicDB, an open source topic maps-based graph store implemented in Python. The Contextualise web application is implemented with the Flask framework.

What are some alternatives?

When comparing PheKnowLator and topic-db you can also consider the following projects:

grakn - TypeDB: the polymorphic database powered by types

Rotten-Scripts - Scripts that will make you go WOW!

rdflib - RDFLib is a Python library for working with RDF, a simple yet powerful language for representing information.

SchemaGPT - Python library for RDF Schemas generation from prompts using GPT-3 magic 🪄🪄🪄

LinkedDataHub - The low-code Knowledge Graph application platform. Apache license.

ckb - Contextual knowledge bases

contextualise - Contextualise is an effective tool particularly suited for organising information-heavy projects and activities consisting of unstructured and widely diverse data and information resources

codex - CoDEx: A set of knowledge graph Completion Datasets Extracted from Wikidata and Wikipedia

OMOP2OBO - OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies

benchmarks - Public dataset benchmarks used for measuring the performance of MindsDB.

extruct - Extract embedded metadata from HTML markup